BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012D04LP1|AL426352
(760 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1780 1498 0.0
>3x_Contig1780
Length = 27883
Score = 1498 bits (755), Expect = 0.0
Identities = 758/760 (99%)
Strand = Plus / Minus
Query: 1 acccatcaaaatgaaaaatccggatgaagtttttacggttattgaagaatacaaagctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5770 acccatcaaaatgaaaaatccggatgaagtttttacggttattgaagaatacaaagctat 5711
Query: 61 cagcgaaaatatcgggggtgaggttccagaaaagatctatttcggaaggttaattcaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5710 cagcgaaaatatcgggggtgaggttccagaaaagatctatttcggaaggttaattcaact 5651
Query: 121 aagcgatcgtgcacggggtgcactagagaagtatgacttgaaaaagagaccttacaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5650 aagcgatcgtgcacggggtgcactagagaagtatgacttgaaaaagagaccttacaaagg 5591
Query: 181 aaccacatcatttgaagctgaattatcactggtaagtgcaaatattgcacaggtaaaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5590 aaccacatcatttgaagctgaattatcactggtaagtgcaaatattgcacaggtaaaacc 5531
Query: 241 agcacatataatgtatgatccattcgttggtactggttcattcctggtggctggtggcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5530 agcacatataatgtatgatccattcgttggtactggttcattcctggtggctggtggcca 5471
Query: 301 ttatggtgctcttgtcttagggtctgatattgatggtaggatgatcagagggaagggaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5470 ttatggtgctcttgtcttagggtctgatattgatggtaggatgatcagagggaagggaca 5411
Query: 361 acaaactatcaaggcaaatttcaagtattataaagagtctatccaattcctggacgtcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5410 acaaactatcaaggcaaatttcaagtattataaagagtctatccaattcctggacgtcat 5351
Query: 421 gacaatggattttacgcataatgcattgagaaaggactttgtcattgatacgatcctttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5350 gacaatggattttacgcataatgcattgagaaaggactttgtcattgatacgatcctttg 5291
Query: 481 tgatcctccatacggtattagagaatcgattaaagttcttggagcaaaggatccggagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5290 tgatcctccatacggtattagagaatcgattaaagttcttggagcaaaggatccggagag 5231
Query: 541 atttgctgggaaagaggatgtggaaattaacggtcaaaaagcttatctacttagagacta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5230 atttgctgggaaagaggatgtggaaattaacggtcaaaaagcttatctacttagagacta 5171
Query: 601 tattccaactaaaaaaccgtactctttagattccctattagacgatttgttggattacgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5170 tattccaactaaaaaaccgtactctttagattccctattagacgatttgttggattacgc 5111
Query: 661 aagtnaaagactccccattaatggtagattggctttctggatgcccactgccaatgamga 720
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5110 aagtcaaagactccccattaatggtagattggctttctggatgcccactgccaatgacga 5051
Query: 721 gaatgttgcaactataattcctcttcattcgaatttggaa 760
||||||||||||||||||||||||||||||||||||||||
Sbjct: 5050 gaatgttgcaactataattcctcttcattcgaatttggaa 5011
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5219
Number of Sequences: 1807
Number of extensions: 5219
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 760
length of database: 10,358,551
effective HSP length: 16
effective length of query: 744
effective length of database: 10,329,639
effective search space: 7685251416
effective search space used: 7685251416
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)